Evolutionary pattern of human respiratory syncytial virus (subgroup A): cocirculating lineages and correlation of genetic and antigenic changes in the G glycoprotein.
Identifieur interne : 000717 ( Main/Exploration ); précédent : 000716; suivant : 000718Evolutionary pattern of human respiratory syncytial virus (subgroup A): cocirculating lineages and correlation of genetic and antigenic changes in the G glycoprotein.
Auteurs : O. García [Espagne] ; M. Martín ; J. Dopazo ; J. Arbiza ; S. Frabasile ; J. Russi ; M. Hortal ; P. Perez-Bre A ; I. Martínez ; B. García-BarrenoSource :
- Journal of virology [ 0022-538X ] ; 1994.
Descripteurs français
- KwdFr :
- Alignement de séquences (MeSH), Amorces ADN (composition chimique), Données de séquences moléculaires (MeSH), Espagne (MeSH), Gènes viraux (MeSH), Humains (MeSH), Infections à virus respiratoire syncytial (épidémiologie), Phylogenèse (MeSH), Protéine HN (MeSH), Protéines de fusion virale (génétique), Protéines de l'enveloppe virale (MeSH), Protéines virales (génétique), Protéines virales (immunologie), Protéines virales structurales (génétique), Similitude de séquences d'acides aminés (MeSH), Séquence d'acides aminés (MeSH), Séquence nucléotidique (MeSH), Uruguay (MeSH), Variation des antigènes (MeSH), Virus respiratoires syncytiaux (génétique), Virus respiratoires syncytiaux (immunologie), Épidémies de maladies (MeSH), Évolution biologique (MeSH).
- MESH :
- composition chimique : Amorces ADN.
- génétique : Protéines de fusion virale, Protéines virales, Protéines virales structurales, Virus respiratoires syncytiaux.
- immunologie : Protéines virales, Virus respiratoires syncytiaux.
- épidémiologie : Infections à virus respiratoire syncytial.
- Alignement de séquences, Données de séquences moléculaires, Espagne, Gènes viraux, Humains, Phylogenèse, Protéine HN, Protéines de l'enveloppe virale, Similitude de séquences d'acides aminés, Séquence d'acides aminés, Séquence nucléotidique, Uruguay, Variation des antigènes, Épidémies de maladies, Évolution biologique.
- Wicri :
English descriptors
- KwdEn :
- Amino Acid Sequence (MeSH), Antigenic Variation (MeSH), Base Sequence (MeSH), Biological Evolution (MeSH), DNA Primers (chemistry), Disease Outbreaks (MeSH), Genes, Viral (MeSH), HN Protein (MeSH), Humans (MeSH), Molecular Sequence Data (MeSH), Phylogeny (MeSH), Respiratory Syncytial Virus Infections (epidemiology), Respiratory Syncytial Viruses (genetics), Respiratory Syncytial Viruses (immunology), Sequence Alignment (MeSH), Sequence Homology, Amino Acid (MeSH), Spain (MeSH), Uruguay (MeSH), Viral Envelope Proteins (MeSH), Viral Fusion Proteins (genetics), Viral Proteins (genetics), Viral Proteins (immunology), Viral Structural Proteins (genetics).
- MESH :
- chemical , chemistry : DNA Primers.
- chemical , genetics : Viral Fusion Proteins, Viral Proteins, Viral Structural Proteins.
- chemical , immunology : Viral Proteins.
- geographic : Spain, Uruguay, Viral Envelope Proteins.
- epidemiology : Respiratory Syncytial Virus Infections.
- genetics : Respiratory Syncytial Viruses.
- immunology : Respiratory Syncytial Viruses.
- Amino Acid Sequence, Antigenic Variation, Base Sequence, Biological Evolution, Disease Outbreaks, Genes, Viral, HN Protein, Humans, Molecular Sequence Data, Phylogeny, Sequence Alignment, Sequence Homology, Amino Acid.
Abstract
The genetic and antigenic variability of the G glycoproteins from 76 human respiratory syncytial (RS) viruses (subgroup A) isolated during six consecutive epidemics in either Montevideo, Uruguay, or Madrid, Spain, have been analyzed. Genetic diversity was evaluated for all viruses by the RNase A mismatch cleavage method and for selected strains by dideoxy sequencing. The sequences reported here were added to those published for six isolates from Birmingham, United Kingdom, and for two reference strains (A2 and Long), to derive a phylogenetic tree of subgroup A viruses that contained two main branches and several subbranches. During the same epidemic, viruses from different branches were isolated. In addition, closely related viruses were isolated in distant places and in different years. These results illustrate the capacity of the virus to spread worldwide, influencing its mode of evolution. The antigenic analysis of all isolates was carried out with a panel of anti-G monoclonal antibodies that recognized strain-specific (or variable) epitopes. A close correlation between genetic relatedness and antigenic relatedness in the G protein was observed. These results, together with an accumulation of amino acid changes in a major antigenic area of the G glycoprotein, suggest that immune selection may be a factor influencing the generation of RS virus diversity. The pattern of RS virus evolution is thus similar to that described for influenza type B viruses, expect that the level of genetic divergence among the G glycoproteins of RS virus isolates is the highest reported for an RNA virus gene product.
DOI: 10.1128/JVI.68.9.5448-5459.1994
PubMed: 8057427
PubMed Central: PMC236945
Affiliations:
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Le document en format XML
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Martín</name></author><author><name sortKey="Dopazo, J" sort="Dopazo, J" uniqKey="Dopazo J" first="J" last="Dopazo">J. Dopazo</name></author><author><name sortKey="Arbiza, J" sort="Arbiza, J" uniqKey="Arbiza J" first="J" last="Arbiza">J. Arbiza</name></author><author><name sortKey="Frabasile, S" sort="Frabasile, S" uniqKey="Frabasile S" first="S" last="Frabasile">S. Frabasile</name></author><author><name sortKey="Russi, J" sort="Russi, J" uniqKey="Russi J" first="J" last="Russi">J. Russi</name></author><author><name sortKey="Hortal, M" sort="Hortal, M" uniqKey="Hortal M" first="M" last="Hortal">M. Hortal</name></author><author><name sortKey="Perez Bre A, P" sort="Perez Bre A, P" uniqKey="Perez Bre A P" first="P" last="Perez-Bre A">P. Perez-Bre A</name></author><author><name sortKey="Martinez, I" sort="Martinez, I" uniqKey="Martinez I" first="I" last="Martínez">I. 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García</name><affiliation wicri:level="3"><nlm:affiliation>Centro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Centro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, Madrid</wicri:regionArea><placeName><settlement type="city">Madrid</settlement><region nuts="2" type="region">Communauté de Madrid</region></placeName></affiliation></author><author><name sortKey="Martin, M" sort="Martin, M" uniqKey="Martin M" first="M" last="Martín">M. Martín</name></author><author><name sortKey="Dopazo, J" sort="Dopazo, J" uniqKey="Dopazo J" first="J" last="Dopazo">J. Dopazo</name></author><author><name sortKey="Arbiza, J" sort="Arbiza, J" uniqKey="Arbiza J" first="J" last="Arbiza">J. Arbiza</name></author><author><name sortKey="Frabasile, S" sort="Frabasile, S" uniqKey="Frabasile S" first="S" last="Frabasile">S. Frabasile</name></author><author><name sortKey="Russi, J" sort="Russi, J" uniqKey="Russi J" first="J" last="Russi">J. Russi</name></author><author><name sortKey="Hortal, M" sort="Hortal, M" uniqKey="Hortal M" first="M" last="Hortal">M. Hortal</name></author><author><name sortKey="Perez Bre A, P" sort="Perez Bre A, P" uniqKey="Perez Bre A P" first="P" last="Perez-Bre A">P. Perez-Bre A</name></author><author><name sortKey="Martinez, I" sort="Martinez, I" uniqKey="Martinez I" first="I" last="Martínez">I. Martínez</name></author><author><name sortKey="Garcia Barreno, B" sort="Garcia Barreno, B" uniqKey="Garcia Barreno B" first="B" last="García-Barreno">B. García-Barreno</name></author></analytic><series><title level="j">Journal of virology</title><idno type="ISSN">0022-538X</idno><imprint><date when="1994" type="published">1994</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence (MeSH)</term><term>Antigenic Variation (MeSH)</term><term>Base Sequence (MeSH)</term><term>Biological Evolution (MeSH)</term><term>DNA Primers (chemistry)</term><term>Disease Outbreaks (MeSH)</term><term>Genes, Viral (MeSH)</term><term>HN Protein (MeSH)</term><term>Humans (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Phylogeny (MeSH)</term><term>Respiratory Syncytial Virus Infections (epidemiology)</term><term>Respiratory Syncytial Viruses (genetics)</term><term>Respiratory Syncytial Viruses (immunology)</term><term>Sequence Alignment (MeSH)</term><term>Sequence Homology, Amino Acid (MeSH)</term><term>Spain (MeSH)</term><term>Uruguay (MeSH)</term><term>Viral Envelope Proteins (MeSH)</term><term>Viral Fusion Proteins (genetics)</term><term>Viral Proteins (genetics)</term><term>Viral Proteins (immunology)</term><term>Viral Structural Proteins (genetics)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Alignement de séquences (MeSH)</term><term>Amorces ADN (composition chimique)</term><term>Données de séquences moléculaires (MeSH)</term><term>Espagne (MeSH)</term><term>Gènes viraux (MeSH)</term><term>Humains (MeSH)</term><term>Infections à virus respiratoire syncytial (épidémiologie)</term><term>Phylogenèse (MeSH)</term><term>Protéine HN (MeSH)</term><term>Protéines de fusion virale (génétique)</term><term>Protéines de l'enveloppe virale (MeSH)</term><term>Protéines virales (génétique)</term><term>Protéines virales (immunologie)</term><term>Protéines virales structurales (génétique)</term><term>Similitude de séquences d'acides aminés (MeSH)</term><term>Séquence d'acides aminés (MeSH)</term><term>Séquence nucléotidique (MeSH)</term><term>Uruguay (MeSH)</term><term>Variation des antigènes (MeSH)</term><term>Virus respiratoires syncytiaux (génétique)</term><term>Virus respiratoires syncytiaux (immunologie)</term><term>Épidémies de maladies (MeSH)</term><term>Évolution biologique (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>DNA Primers</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Viral Fusion Proteins</term><term>Viral Proteins</term><term>Viral Structural Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="immunology" xml:lang="en"><term>Viral Proteins</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Spain</term><term>Uruguay</term><term>Viral Envelope Proteins</term></keywords><keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Amorces ADN</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Respiratory Syncytial Virus Infections</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Respiratory Syncytial Viruses</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Protéines de fusion virale</term><term>Protéines virales</term><term>Protéines virales structurales</term><term>Virus respiratoires syncytiaux</term></keywords><keywords scheme="MESH" qualifier="immunologie" xml:lang="fr"><term>Protéines virales</term><term>Virus respiratoires syncytiaux</term></keywords><keywords scheme="MESH" qualifier="immunology" xml:lang="en"><term>Respiratory Syncytial Viruses</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Infections à virus respiratoire syncytial</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term><term>Antigenic Variation</term><term>Base Sequence</term><term>Biological Evolution</term><term>Disease Outbreaks</term><term>Genes, Viral</term><term>HN Protein</term><term>Humans</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Sequence Alignment</term><term>Sequence Homology, Amino Acid</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Alignement de séquences</term><term>Données de séquences moléculaires</term><term>Espagne</term><term>Gènes viraux</term><term>Humains</term><term>Phylogenèse</term><term>Protéine HN</term><term>Protéines de l'enveloppe virale</term><term>Similitude de séquences d'acides aminés</term><term>Séquence d'acides aminés</term><term>Séquence nucléotidique</term><term>Uruguay</term><term>Variation des antigènes</term><term>Épidémies de maladies</term><term>Évolution biologique</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Espagne</term><term>Uruguay</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The genetic and antigenic variability of the G glycoproteins from 76 human respiratory syncytial (RS) viruses (subgroup A) isolated during six consecutive epidemics in either Montevideo, Uruguay, or Madrid, Spain, have been analyzed. Genetic diversity was evaluated for all viruses by the RNase A mismatch cleavage method and for selected strains by dideoxy sequencing. The sequences reported here were added to those published for six isolates from Birmingham, United Kingdom, and for two reference strains (A2 and Long), to derive a phylogenetic tree of subgroup A viruses that contained two main branches and several subbranches. During the same epidemic, viruses from different branches were isolated. In addition, closely related viruses were isolated in distant places and in different years. These results illustrate the capacity of the virus to spread worldwide, influencing its mode of evolution. The antigenic analysis of all isolates was carried out with a panel of anti-G monoclonal antibodies that recognized strain-specific (or variable) epitopes. A close correlation between genetic relatedness and antigenic relatedness in the G protein was observed. These results, together with an accumulation of amino acid changes in a major antigenic area of the G glycoprotein, suggest that immune selection may be a factor influencing the generation of RS virus diversity. The pattern of RS virus evolution is thus similar to that described for influenza type B viruses, expect that the level of genetic divergence among the G glycoproteins of RS virus isolates is the highest reported for an RNA virus gene product.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">8057427</PMID><DateCompleted><Year>1994</Year><Month>09</Month><Day>09</Day></DateCompleted><DateRevised><Year>2020</Year><Month>07</Month><Day>24</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0022-538X</ISSN><JournalIssue CitedMedium="Print"><Volume>68</Volume><Issue>9</Issue><PubDate><Year>1994</Year><Month>Sep</Month></PubDate></JournalIssue><Title>Journal of virology</Title><ISOAbbreviation>J. Virol.</ISOAbbreviation></Journal><ArticleTitle>Evolutionary pattern of human respiratory syncytial virus (subgroup A): cocirculating lineages and correlation of genetic and antigenic changes in the G glycoprotein.</ArticleTitle><Pagination><MedlinePgn>5448-59</MedlinePgn></Pagination><Abstract><AbstractText>The genetic and antigenic variability of the G glycoproteins from 76 human respiratory syncytial (RS) viruses (subgroup A) isolated during six consecutive epidemics in either Montevideo, Uruguay, or Madrid, Spain, have been analyzed. Genetic diversity was evaluated for all viruses by the RNase A mismatch cleavage method and for selected strains by dideoxy sequencing. The sequences reported here were added to those published for six isolates from Birmingham, United Kingdom, and for two reference strains (A2 and Long), to derive a phylogenetic tree of subgroup A viruses that contained two main branches and several subbranches. During the same epidemic, viruses from different branches were isolated. In addition, closely related viruses were isolated in distant places and in different years. These results illustrate the capacity of the virus to spread worldwide, influencing its mode of evolution. The antigenic analysis of all isolates was carried out with a panel of anti-G monoclonal antibodies that recognized strain-specific (or variable) epitopes. A close correlation between genetic relatedness and antigenic relatedness in the G protein was observed. These results, together with an accumulation of amino acid changes in a major antigenic area of the G glycoprotein, suggest that immune selection may be a factor influencing the generation of RS virus diversity. The pattern of RS virus evolution is thus similar to that described for influenza type B viruses, expect that the level of genetic divergence among the G glycoproteins of RS virus isolates is the highest reported for an RNA virus gene product.</AbstractText></Abstract><AuthorList CompleteYN="N"><Author ValidYN="Y"><LastName>García</LastName><ForeName>O</ForeName><Initials>O</Initials><AffiliationInfo><Affiliation>Centro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Martín</LastName><ForeName>M</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Dopazo</LastName><ForeName>J</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Arbiza</LastName><ForeName>J</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Frabasile</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Russi</LastName><ForeName>J</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Hortal</LastName><ForeName>M</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Perez-Breña</LastName><ForeName>P</ForeName><Initials>P</Initials></Author><Author ValidYN="Y"><LastName>Martínez</LastName><ForeName>I</ForeName><Initials>I</Initials></Author><Author ValidYN="Y"><LastName>García-Barreno</LastName><ForeName>B</ForeName><Initials>B</Initials></Author></AuthorList><Language>eng</Language><DataBankList 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UI="D003160">Comparative Study</PublicationType><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>J Virol</MedlineTA><NlmUniqueID>0113724</NlmUniqueID><ISSNLinking>0022-538X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D017931">DNA Primers</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D015707">HN Protein</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014759">Viral Envelope Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014760">Viral Fusion Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014764">Viral 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